S/MARt DB - S/MARbinder

AC  SB000079
XX
DT  15.2.2002 18:53:00 (created); ili
DT  15.2.2002 18:55:00 (updated); ili
XX
NA  CDP
XX
OS  human, Homo sapiens
OC  eukaryota; animalia; metazoa; chordata; vertebrata;
OC  tetrapoda; mammalia; eutheria; primates
XX
FF  transcription factor, look up the TRANSFAC cross reference
FF  for more details
XX
IN  SB000001; SATB1
XX
BS  SM0000159; HPV$LCR-MAR [1]
MM  direct gel shift;
PR  several 31-mers representing the whole MAR [1]
SO  HeLa; human
QA  6
BS  SM0000159; HPV$LCR-MAR [1]
MM  gel shift competition;
PR  probe represents pos. 7209 to 7239 of the virus genome
PR  [1]
SO  HeLa; human
QA  6
BS  SM0000160; HPV$E6-MAR [1]
MM  direct gel shift;
PR  several 40-mers representing the whole MAR [1]
SO  HeLa; human
QA  6
BS  SM0000160; HPV$E6-MAR [1]
MM  supershift (antibody binding);
PR  probe represents pos. 374 to 403 of the virus genome [1]
SO  HeLa; human
QA  6
BS  SM0000160; HPV$E6-MAR [1]
MM  gel shift competition;
PR  probe represents pos. 374 to 403 of the virus genome [1]
SO  HeLa; human
QA  6
XX
DR  TRANSFAC FACTOR: T00100;  
XX
RN  [1]
RX  MEDLINE; 20148940 PubMed; 10684263
RA  Stuenkel, W., Huang, Z., Tan, S.-H., O'Connor, M. J.,
RA  Bernard, H.-U.
RT  Nuclear matrix attachment regions of human papillomavirus
RT  type 16 repress or activate the E6 promoter, depending on
RT  the physical state of the viral DNA
RL  J. Virol. 74:2489-2501 (2000)
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