S/MARt DB - S/MAR

AC  SM0000347
XX
DT  1.8.2001 16:15:07 (created); ili
DT  7.3.2002 17:23:00 (updated); ili
XX
NA  SBI$ADH-3MAR
XX
SY  SBI$110K5-MAR5, p3sMAR, 
XX
OS  Sorghum bicolor
OC  eukaryota; viridiplantae; embryobionta; magnoliophyta;
OC  liliopsida; commelinidae; cyperales; poaceae
XX
SZ  2420 bp
XX
LO  J
DE  G001340; open reading frame
DP  Pos 1: ATG
DN  Internal: n; Gene position numeral: 1
DE  G002584; alcohol dehydrogenase
DP  Direction: 3'; Pos 1: ATG
DN  Internal: n; Gene position numeral: -1

G002584;
alcohol dehydrogenase
G001340;
open reading frame

XX
SQ  CCGCGGCGACGGCGACACCACCGCAGCATCCTCCCAGTCCCAACACCATGATGATCGATC
SQ  GACCGCGCTGCACGACCTTCTCCTCAGCCGATCACCTCCTGAGATGACTGCGTTTAATTT
SQ  GTGCTCTCTGGCGCCTGGTCTGCTGCTAGTTTTTTTCCCCGATGATGATCTTGCACTTGT
SQ  ACTGCTGTGTCTTGCTGCGTCTTTGAGTGTGGTAGGCTGCTCTGGCAGCGTGCATTTATA
SQ  TATATAGGAGGTGGTTGCTGATGAGTTCCTTCCGTGATGCGGTGCTTTTGTTGCTAGGGG
SQ  CCTAGGGGGTCCAAGGAGGAGCACGAAGAGGAGGGCAGCTTGAAGCTTCGTCCACGAGAA
SQ  GGCCGGGAGAATAATCTACCTGTTTGACGTGCTTGCTCATCGCGTTCTCCTGCTGACGCT
SQ  GCCTTGGCTGCCAAGGCTCCATTTCCATTTGACTTGGTCGATAAGGTTCTTGGTGTCCAG
SQ  TCAATCCAACACGTGCGAGTAGCGGTCTGGCGGACACGAGAGGGGAACTCTGGCCTTGTT
SQ  TAGGCCTTGTTTAGTTCCCAAAAAATTTTACAAATTTTTTCAGATTTTCCGTCACATCGA
SQ  ATCTTTAGACACATGCATGAAGCACTAAATATAGATAAAAATAAAAACTAATTGCACAGT
SQ  TTGGTCGGAATTGACGAGACAAATTTTTTGAGCCTAGTTAGTCCATGATTGAACAATATT
SQ  TGTCAAATAGAAACGAAAAAGCTACAGTGTCCATTTTGCAAAATATTTTGGAACTAAACA
SQ  AGGCCTTAGTTGCCAGAAAATTTTGTAAAATTTTTTAGATTCCCCGTCACATCAAATTTT
SQ  TAGACGCATGCATGAAGTATTAAGTATAGACAAAAAAAAACTAATTGTACAGTTTGGTCC
SQ  GAATTGACGAGACAAATCTTTTGAATCTAGTTAGTACATGTTTAGATAATATTTGTCAAA
SQ  CACAAACGAAAATAGTATTATTTCAATTTTGCAAAATTTTTTGGAACTAAACAAGGCCTT
SQ  TCTTGTGGCTGTGGCTGTGCTGCTGTGGGAGATACGTACTCCCTTCGTCCCAAAAGAGTG
SQ  TCGTTTTAGAATTTTAGACAACTTATTTGATCATTCGTCTTATTCAAAAATTTTACATAA
SQ  ATATTATATATTTTGTTAAGACTTATTTTATCATTACAGATACTTTGCTCATGATTAATT
SQ  TATTTTGTAATTTATATAAATTTTTAAATAAGACGAAGGGTCAAACGTGATATCTCAAAA
SQ  TCAAAAACGTCATTTTTTTTTTGGGACGGAGGGAGTATATAATAAGAGACGAAAACGGCG
SQ  CTGTGAACTGAAAATGACAACTGATGTGGGGCGGTGGGTTCGTTAATTTGCGACGTGCTC
SQ  CGGCCGTCAGACTCAGATCACAGCTAGTACTACTTGGCGGCTGATGCTGTTGATTTCTTG
SQ  TGGCTTTCGAGTTTTAGTTTTCACCGCTACCCTTTTTCTTGTGGTCTCGAGCATATAATT
SQ  TAATAACAAGTGATGAATGACTCGTTTTTTCTCGCTTTTGTGGTTGAATAGCTCAATAAT
SQ  TACGACGCCGCGACCAAAGGAATGGAAGACCTTGGCGCTGAAGGCATACACCAGTACACC
SQ  AGCAAGTAGTCAGCACTAGAATTCAACTAGTACCTGGAAGCATGCACATGCATGCATGCA
SQ  TCTAGAGTTTGTCTCGGATTCTTCATGTCCATCCTTCAGCATGAAAAAAAAAAGTGCCAG
SQ  CAACGCTCCAACACAAGCATTACCAACTCAGCAACAACTATATAACCACTAGTCCAAAGG
SQ  CTCCAGCGAATATAATCCCAGTTATCCCGATGGCTCAGCTCGGAGTTGCTGTTGCTGGCA
SQ  GCCTTTCTGGTGCTGCTCCTGCAGCAGGAAAGAAGACGGCCTCACCACCTCCAAAACCAA
SQ  AAGGCGGAGAACCGACTATGAAACGGCAATCAGCTAAAGATCAGGAAGCGGTTGCCCAGG
SQ  TTTTGGGTGCGCGGAAGATGGGAGAAGATGTCGGGGATGCTGCAGACGTGGAGGGGGAGA
SQ  GGAAGAGGAAGAGAGCTCCCATCGTGGTGCATCACTTCCCCTTCCATCCCCGCCCTGGAC
SQ  TGCTGTGACTCCATTTCTTCTGTCTTGTTTGGACATTGAGTTCTTGTAAAGTAATGCTAT
SQ  TGTTCTTGGAAGATGGAGAGAAGTTTAGCATGTAGACAGAGTTTGCTGTCTAAGCGGGCA
SQ  GGCATGCAGCTAGCCCTTTTATCACTTAGGTGATGATTTGTTTTTCCAAGGTTATTGTGT
SQ  GCTTGGTCTTCAATATTTGCCCTCTCTTTTCCTTATTATTAGTTCGATGTGGTGTAGTCA
SQ  GTCTCACATACATTGCTGTGATAAACACTATGTTAAGAAGAAGAAAAAAAATTCAGCAAT
SQ  CTAGTTTAGTTAAACAATTG
SC  EMBL #AF124045; nt 14433-16852, release 60
XX
SF  contains MITE elements [1]
XX
TP  considered as permanent [1]
XX
EV  in vitro selection of S/MAR [1]
XX
DR  EMBL: AF124045; AF124045
XX
RN  [1]
RX  MEDLINE; 20129767 PubMed; 10662861
RA  Tikhonov, A. P., Bennetzen, J. L., Avramova, Z. V.
RT  Structural domains and matrix attachment regions along
RT  colinear chromosomal segments of maize and sorghum
RL  Plant Cell 12:249-264 (2000)
//