S/MARt DB - S/MAR

AC  SM0000420
XX
DT  22.2.2002 18:24:00 (created); ili
DT  26.2.2002 13:34:00 (updated); ili
XX
NA  HS$D19S208_8
XX
OS  human, Homo sapiens
OC  eukaryota; animalia; metazoa; chordata; vertebrata;
OC  tetrapoda; mammalia; eutheria; primates
XX
SZ  439 bp
XX
LO  19q13.12
DE  G003014; nephrosis 1, nephrin
DP  Direction: 3'; Pos 1: transcriptional start
DN  Internal: y; Gene position numeral: 0
DC  in the 17th intron of NPHS1 [L. Nikolaev, direct submission]
XX
SQ  GATCTACCCACCCATCCATTCATCAATTCATCCATCATCCTTCCATAGATATCTTTCCTC
SQ  TGATGGTGTATCCGTCCATCATCTACCCTCTATCCACTGATTTTTCTCCTTCAATCATCT
SQ  TCCCACCCATCCACTCACCCATTTATCCATCCTTTCACTTGTCCATCTGTTCCTCCATCC
SQ  ACTCACTCATTCATCCACCTGTTCATCCACTTACCTACCTTTTGACCTATCTATCCATCT
SQ  ACCTACCCACTCGCCTGGCTGTCTAGCCATTTATCCATGCATTCATTTTGCCACCAACAG
SQ  TTATTCATTCTGGGAGCATGCCCTGGCGAGTATATAGTTATAAGGGTCATACAGATGTAT
SQ  GTGGTCCCCACTCCCAAGGAACTCACAGTCAAGAAACCACAACCCCTTGACCCCACCTCT
SQ  ATTCACCAAAGGCTGGATC
SC  [L. Nikolaev, direct submission]
XX
BP  120%, i.e. binds stronger than a 10-fold repeat of the 25-bp base unit of SM0000046 [1]
XX
EV  in vitro selection of S/MAR [1]
XX
DR  EMBL: AC002133; HSAC2133
XX
RN  [1]
RX  MEDLINE; 21671420 PubMed; 11813264
RA  Chernov, I. P., Akopov, S. B., Nikolaev, L. G., Sverdlov,
RA  E. D.
RT  Identification and mapping of nuclear matrix-attachment
RT  regions in a one megabase locus of human chromosome
RT  19q13.12: long-range correlation of S/MARs and gene
RT  positions
RL  J. Cell. Biochem. 84:590-600 (2002)
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