S/MARt DB - S/MAR

AC  SM0000513
XX
DT  27.2.2004 18:06:00 (created); ili2
DT  1.3.2004 13:51:00 (updated); ili2
XX
NA  MOUSE$SBS-418
XX
OS  mouse, Mus musculus
OC  eukaryota; animalia; metazoa; chordata; vertebrata;
OC  tetrapoda; mammalia; eutheria; rodentia; myomorpha; muridae;
OC  murinae
XX
SZ  ca. 1200 bp
XX
LO  19
DE  G009260; eukaryotic translation elongation factor 1 gamma
DP  Direction: 3'; 46000 - ; Pos 1: transcriptional start
DN  Internal: n; Gene position numeral: 1
DE  G009261; KIAA1598 homolog
DP  Direction: 5'; 57600 - ; Pos 1: transcriptional start
DN  Internal: n; Gene position numeral: 2

G009260;
eukaryotic translation elongation factor 1 gamma
G009261;
KIAA1598 homolog

XX
SF  A/T/C sequence context [1]; (GA) repeat [1]
XX
FF  obtained in a search for SATB1 binding sites in vivo
FF  [1]; in the thymus of SATB1 knockouts the gene encoding
FF  translation elongation factor gamma was upregulated while
FF  the KIAA1598 homolog was ectopically expressed [1]
XX
EV  flourescence in situ hybridization (FISH) [1]
EC  amplified FISH was shown for halos from wt and SATB1
EC  knockout cells [1]
XX
BF  SB000001; SATB1 [1]
MM  assessment of the dissociation constant; 2 nM
SO  mouse; mouse
QA  6
BF  SB000001; SATB1 [1]
MM  chromatin immunoprecipitation (ChIP); 
SO  mouse thymus; mouse
QA  6
XX
RN  [1]
RX  MEDLINE; 22608347 PubMed; 12692553
RA  Cai, S., Han, H.-J., Kohwi-Shigematsu, T.
RT  Tissue-specific nuclear architecture and gene expression
RT  regulated by SATB1
RL  Nat. Genet. 34:42-51 (2003)
//